Subtracting bed file from whole genome
Hi,
I have a list of hg38 genomic regions in a bed file. I want to subtract these regions from whole genome sequence and get resultant regions in another bed file. What would be the appropriate way to do that? What I thought was to create whole genome bed file based on hg38.chroms.sizes file and then use bedtools subtract, but I was wondering if there could be some other appropriate way?
Thank you
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ATpoint
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arsala521 •
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arsala521 •
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