RNA-seq vs scRNA seq comparison
Hello,
I performed bulk RNA-seq and single cell RNA sequencing on the same samples. Is there a way to find common Differentially Expressed Genes (DEGs) from both these techniques? Thank you!
• 932 views
•
link
written
by
abhay.kanodia •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Differential expression genes(downstream analysis)
written by odi •
-
Creating a Single-Cell Signature Matrix for Bulk RNA-seq Deconvolution
written by Lloyd98 •
-
Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
written by AlexStar •
-
How to compare the human single cell RNA-seq clusters with mouse bulk RNA-seq
written by saigro16 •
-
Differential Expression analysis between single cell RNa seq & bulk RNa seq data
written by bioyas •
-
Single cell cluster annotation and validation tools: recommendations?
written by A248 •
-
Best way to present the single cell RNA-seq data and bulk RNA-seq expression data together
written by Naresh D J •
-
Cutting Edge Single Cell Analysis Methods?
written by informatics bot
-
Best way to perform single-cell RNA-seq normalization
written by igor
-
Ideas For Best Representation Of Differentially Expressed Genes
written by Dataminer
Could you elaborate a bit more your question ? Have you performed different analyses and now you want to intersect the results ?
Hello Basti,
Thanks a lot for your response. I have one single cell line; MCF10A. I performed bulk RNA seq on certain knockouts of this cell line and another colleague in the lab had performed single cell RNA sequencing. No we want to compare the DEGs between both these methods.