Predicting celltype from only single cell ATAC Seq analysis
I am analyzing single-cell multi-omics ATAC seq data and I do not have sc RNA seq data. Is it possible to predict cell type from only sc ATAC seq data in SEURAT?
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Alexander •
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halimaakhter014 •
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halimaakhter014 •
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I think theoretically it should be possible. Have you tried to look at the accessibility of the promotor regions near the marker genes?
What can we "see" with single cell ATAC-seq data ? (e.g. cell cycle - possible or not ? ) Figure here shows that it should be possible