I am looking for a CA-based tool.
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user366312 •
Secondary structure assignment tool.
Is there any CA-based online tool/web-server available for secondary structure assignment of proteins except DSSP or STRIDE?
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DSSP is considered a gold standard for this purpose, and STRIDE was popular as well at some point. I am pretty sure that you will encounter problems in some shape or form using other algorithms. But since you asked, here goes:
- http://prodata.swmed.edu/palsse/palsse.php
- https://lcb.infotech.monash.edu/sstweb2/Submission_page.html
Also, there are many secondary structure prediction programs.
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Mensur Dlakic
The less you say when explaining your problem, the less useful feedback you get.
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Mensur Dlakic
Yes, that was my mistake. I am sorry for that.
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