Obtaining European allele frequencies for TopMed SNPs
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2.2 years ago
4galaxy77 2.8k

I have a list of SNPs (~21m) that have been imputed using the TOPMed imputation server.

I am interested in the allele frequency at these SNPs in European individuals.

Is there a way of querying the TOPMed database for allele frequencies in a particular population, possibly using an API of some kind? If not, is there another database which includes all/most of the TOPMed SNPs and can be queried to obtain European frequency estimates?

topmed allele-frequency • 394 views
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