More posts like this
-
which value is selected for pearson correlation for cis and trans target gene prediction ?
written by anisha 0I want to analyses the cis and trans target gene from the RNA-seq data. i had read several paper and it shows that either PCC …
-
Identification of lncRNA target genes
written by Reza 1Dear all, I have RNA seq data from different tissues of one plant with the reference genome. I am trying to find out target genes …
-
Target genes of lncRNAs
written by Reza 1Dear all, I have RNA seq data from different tissues of one plant with the reference genome. I am trying to find out target genes …
-
Physical interaction of long non-coding RNAs with target genes
written by seta 191Dear all, As we know, some long non-coding RNAs (lncRNAs) have the trans-regulatory role via the physical interaction with target genes. Assuming these lncRNAs or …
-
What is the cutoff to identify the potential protein-coding gene targets of lncRNAs
written by aboozar.soorni 3Accordingly, potential target genes of the lncRNAs are identified by searching the protein coding genes located upstream and downstream of each lncRNA and nearest genes …
-
How to detect cis and trans protein coding genes of interested lncRNAs?
written by newbie 14Hello Everyone, I have 10 tumor samples and I'm interested in identifying lncRNA function. I see that for WGCNA, minimum sample size should be 20. …
-
Want to get advice on some trans-eQTL result
written by namkungho87 3Hi, I am performing both cis and trans eQTL for two genes of interest (we have profiled two specific genes of interest using qRT-PCR). Anyway, …
-
Estimating gene set enrichment using Fishers exact test
written by Biologist 29Hi, I'm working with lung cancer data and I'm interested in lncRNAs, I would like to identify lncRNAs that target key pathways. Recently, I read …
-
How To Identify Cis And Trans Conformation Of Proline?
written by aleeha 1<p>How can I find a proline is in cis and trans conformations? Is it possible to find from pdb files? or any tools available to …
-
Identifying The Target Genes Of Unkown Genes In Cis- And Trans- Mechanism
written by psstshush 0<p>Hi, I’m doing Microarray analysis to identify the target genes in cis and trans Mechanism. Trans is about Cis Mechanism is that, the known protein-coding …