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newbie
newbie
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5.7 years ago
Latest posts by user
0 votes
1 reply
1.6K views
How to get information about antisense/sense lncRNAs?
rna-seq lncrna gencode
updated by jared.andrews07 1.9K • | written by newbie 14
0 votes
1 reply
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Comment: C: How to get transcript ID and tpm from the gtf files of ballgown outputs?
written by newbie 14
0 votes
3 replies
2.4K views
How to get transcript ID and tpm from the gtf files of ballgown outputs?
rna-seq ballgown hisat2 gtf awk
updated by Ram 4.5K • | written by newbie 14
0 votes
1 reply
0 views
Comment: C: Kmeans in R for clustering on significant gene list by sample
written by newbie 14
0 votes
1 reply
352 views
How to extract the transcripts with specific class_codes from a gtf file
rna-seq awk gtf grep
written by newbie 14
0 votes
1 reply
2.0K views
Problem with bedtools intersect with two gtfs
rna-seq gtf bedtools intersect
written by newbie 14
0 votes
1 reply
268 views
Question about gffcompare using multiple reference annotations from different databases
rna-seq hisat2 stringtie gffcompare
written by newbie 14
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0 replies
0 views
Comment: C: Is it good to merge transcripts tpm to gene which is of different gene type?
written by newbie 14
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0 replies
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Comment: C: Merge TPM for transcripts to genes Kallisto
written by newbie 14
0 votes
5 replies
3.1K views
Is it good to merge transcripts tpm to gene which is of different gene type?
rna-seq kallisto tpm
updated by wensulin93 0 • | written by newbie 14
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0 replies
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Comment: C: Why counts to tpm gives different values compared to tpm from kallisto?
written by newbie 14
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1 reply
0 views
Comment: C: Why counts to tpm gives different values compared to tpm from kallisto?
written by newbie 14
0 votes
4 replies
3.9K views
Why counts to tpm gives different values compared to tpm from kallisto?
rna-seq tpm kallisto rawcounts featurecounts
written by newbie 14
0 votes
1 reply
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Comment: C: Interpretation of two PCA plots
written by newbie 14
0 votes
4 replies
3.7K views
Interpretation of two PCA plots
rna-seq pca clustering
updated by swbarnes2 1.5K • | written by newbie 14
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0 replies
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Comment: C: How to get the output on multiple files into one file in sbatch script?
written by newbie 14
0 votes
1 reply
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Comment: C: How to get the output on multiple files into one file in sbatch script?
written by newbie 14
0 votes
5 replies
3.4K views
How to get the output on multiple files into one file in sbatch script?
rna-seq strand rseqc sbtach slurm
updated by Biostar 380 • | written by newbie 14
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1 reply
0 views
Comment: C: Why there are low assigned reads in featureCounts output and different outputs f
written by newbie 14
0 votes
1 reply
0 views
Comment: C: Why there are low assigned reads in featureCounts output and different outputs f
written by newbie 14
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