In this example image, how do we know if there are any tumor-type enriched mutations? do we look at # Mut in Sample column? if yes, what number is considered as enriched mutations?
Hi friends, I have cancer patients with a condition. I have done GSEA for whole RNA-seq of tumor (protein-coding genes) comparing patients with and without …
by looking at mRNA vs mut type, how we interpret the TP53 expression difference between truncating and missense mutations. https://ibb.co/Ld8KWD3 [image from cibioportal][1] Is this …