How can I calculate LD ?

I have sequencing data in .vcf format of expanded whole exome sequencing of 2 trios (father, mother & index) one family is affected and another is not affected, I want to find out whether any linkage block is present in any one of these family, so how I will proceed ?

block linkage disequilibrium ld

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updated 4.7 years ago by GenoMax

• written 4.7 years ago by Debashis •

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