Can I traverse/enumerate PDB one at a time using a Python script without downloading all of them to my local disk?
What would be the total size of all PDB files in RCSB?
Can I traverse/enumerate them one at a time using a Python script without downloading all of them to my local disk?
I need a python script that is able to list the names one by one so that I can apply some kind of processing on each name.
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Last time I downloaded the PDB70 database it was about 30GB if memory serves. Best way to traverse the database without downloading them would be to use the
Entreztools I would think.I need a python script that is able to list the names one by one so that I can apply some kind of processing on each name.
Take a look at tools like: https://github.com/williamgilpin/pypdb or the PDB RESTful API