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how to get the name of a protein from a sequence?

I have over 10000 protein sequences and I want to know if there is a way to get their names based on Human database ?

proteome

1 answer

You blast your sequences against the human database and go from there.

@lieven.sterck only with 10000 sequence? how should I arrange my fasta?

you put them all in a single fasta file and start the blast.

Is the 'issue' that you are planning to use the web-resource from NCBI blast?

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