Get chromosome names of a bigwig file
I would like to extract the chromosome names from a bigwig (.bw) file. Is there an existing tool/command?
(I need to verify they match the genome annotation file I am working with + diagnose failing multiBigwigSummary)
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bigwigInfo --chroms from UCSC Kent Utils (http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/) looks like a good option to do this.
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