I tried to convert my bedGraph file to bigwig file using "bedGraphToBigWig" tool. while doing so, I ran this code : > bedGraphToBigWig H3K4me3.unique.bedGraph hg38.chrom.sizes …

I am trying to convert bedGraph to bigWig file with bedGraphToBigWig. but I always get "1 is not found in chromosome sizes file". I used …

I am doing some ChIP seq analysis and was trying to convert my bedgraph file to bigwig using bedGraphToBigWig package so I could visualize my …

I am trying to generate a merged bigwig file using multiBigwigSummary for using in the plotCorrelation tool in deepTools. However, the 8 files are running …

Hi I am trying to convert BAM file to BedGraph and ultimately to BigWig file. To install bedGraphToBigWig on cluster system, I did: URL=http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64 curl …

Hello, I I tried to use makeBigWig.pl Acutally, bedGraphToBigWig has installed. Thanks for any help! Yue administrator@ACB-HuangLab-Ubuntu:~/homer_01/bin$ perl makeBigWig.pl PU.1-ChIP-Seq/ mm9 -webDir /var/www/bigWigs/ -url http://ChuckNorrisU.edu/bigWigs …

I have 100 bedGraph files that I need to reformat before converting them into bigWig files for display in UCSC Genome Browser. Briefly: - These …

Hello, I'm a RNA-seq novice trying to convert bedgraph files to BigWig files using bedGraphtoBigWig. I installed and opened it already, but not sure how …

I have a bedgraph of a full genome mm9: chr1 3049360 3053345 0 chr1 3049360 3053345 0 chr1 3049360 3053345 0 chr1 3049360 3053345 0 …

Hi, I was trying to use [bamTobw][1] to convert bam to bigwig file. The bash file had an issue when trying to convert bedgraph into …