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chrisclarkson100
chrisclarkson100
Reputation:
160
Joined:
11.9 years ago
Last seen:
2 months ago
Location:
European Union
Latest posts by user
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Comment: Comment: wrapping htslib and parsing CRAM files
written by chrisclarkson100 chrisclarkson100
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2 replies
899 views
wrapping htslib and parsing CRAM files
expansionhunterdenovo htslib cram
written by chrisclarkson100 chrisclarkson100
0 votes
1 reply
1.1K views
background nucleotide probability when finding TF binding sites in GRCh38
binding transcription factor
updated by Matthias Zepper Matthias Zepper • written by chrisclarkson100 chrisclarkson100
2 votes
0 replies
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Answer: Answer: finding compatible version of reference genome for use of GATK
written by chrisclarkson100 chrisclarkson100
3 votes
5 replies
3.3K views
finding compatible version of reference genome for use of GATK
bowtie2 gatk
updated by Divon • Divon • written by chrisclarkson100 chrisclarkson100
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0 replies
766 views
Best software for hQTL analysis with the aim of performing MR analysis
mendelianrandomisation hqtl
written by chrisclarkson100 chrisclarkson100
0 votes
1 reply
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Comment: Comment: formatting error: Calculate LD matrix from bgen file
written by chrisclarkson100 chrisclarkson100
0 votes
3 replies
3.0K views
formatting error: Calculate LD matrix from bgen file
plink ld_matrix
updated by Ram Ram • written by chrisclarkson100 chrisclarkson100
1 vote
0 replies
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Answer: A: Error when using Bedtools fisher on sorted bed files
written by chrisclarkson100 chrisclarkson100
1 vote
1 reply
0 views
Answer: A: tabix indexing a GTEx variant file- ':' delimited
written by chrisclarkson100 chrisclarkson100
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0 replies
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Comment: C: tabix indexing a GTEx variant file- ':' delimited
written by chrisclarkson100 chrisclarkson100
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4 replies
1.9K views
tabix indexing a GTEx variant file- ':' delimited
snp next-gen assembly
written by chrisclarkson100 chrisclarkson100
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Comment: C: Convert SNPs from GrCh38 to 37
written by chrisclarkson100 chrisclarkson100
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Comment: C: uploading bigwig file (converted from BED) to UCSC genome browser: Unrecognized
written by chrisclarkson100 chrisclarkson100
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1 reply
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Comment: C: uploading bigwig file (converted from BED) to UCSC genome browser: Unrecognized
written by chrisclarkson100 chrisclarkson100
1 vote
4 replies
6.9K views
uploading bigwig file (converted from BED) to UCSC genome browser: Unrecognized format line 1
assembly chip-seq software error
updated by ruisergioluis • ruisergioluis • written by chrisclarkson100 chrisclarkson100
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Comment: C: MEME-Chip output lacks motif names
written by chrisclarkson100 chrisclarkson100
0 votes
1 reply
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Comment: C: MEME-Chip output lacks motif names
written by chrisclarkson100 chrisclarkson100
0 votes
1 reply
2.9K views
Am I correctly converting MotifDb PFMs to PWMs?
sequence pwm pfm
written by chrisclarkson100 chrisclarkson100
0 votes
1 reply
1 view
Comment: C: trying to reproduce heat map made via cBioportal using download data
written by chrisclarkson100 chrisclarkson100
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