Annotating CNV

Hi Guys,

I have variants generated using CNVnator, I was wondering what tools are best for annotating the variants. I also want to add gnomad frequencies to the variants what would be the best possible tool for it? I have use ANNOVAR but it does not add gnomad frequencies to it.

Please I am stuck here any help would be much appreciated.

Best, Rayz

gnomad annotation

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updated 5.1 years ago by Ram

• written 5.1 years ago by akshitiz09 •

You can prep your own annotation files for ANNOVAR, or use bcftools annotate.

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written 5.1 years ago by Ram

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