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3d structure without PDB

Hello Everyone,

I want to ask how can I do a 3d structure on data that doesn't have a PDB code.

Thanks

python biopython
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updated by Ram Ram • written by dachi • dachi

1 answer

You can model the protein using homology modeling/threading

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written by english.server english.server

Doesn't work for me cause I get a PDB code with small data that not contains the position that I want to see.

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written by dachi • dachi

You can model a whole protein molecule using homology modeling/threading. That starts with a Fasta file. You may use Modeler if you want to model missing residues inside a protein. That starts from a PDB file.

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written by english.server english.server

I tried the homology modeling in swiss modeling but it gives me a PDB code that not contains a position that I want.

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written by dachi • dachi

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