Duplicate ID in plink
xxx@ubuntu:~/Biosoft/plink$ ./plink \
> --bfile ~/lcj/bc_anhui/PLINK-Data/breast-qc \
> --clump-p1 1 \
> --clump-r2 0.1 \
> --clump-kb 250 \
> --clump ~/lcj/bc_anhui/PLINK-Data/breast2.assoc \
> --clump-snp-field SNP \
> --clump-field P \
> --out breast-anhui
It returns an error
Error: Duplicate ID 'rs3737665'.
I dont know how to find and remove the duplicate ID. Thank you.
• 1,410 views
•
link
0 answers
No answers yet.
Log in to answer this question.
Duplicate ID in bed file