Hi I have targeted sequencing (WGS) I have uploaded bam and vcf file for sample; From these screenshot which one shows/support this mutation ![enter image …
MCscan (python version) in Linux relies on .blocks, .bed, and layout files to display microsynteny between genomes. .blocks file provides gene pairs information. .bed file …
Hi, I want to retrieve data from http://www.candidagenome.org/. For example with Candida albicans, I want to retrieve the data from all genes of Candida albicans …
Hi everyone, I am trying to make copy number variant analysis with CNVkit tool. I applied the standard procedure to find copy number variants. -target …
Hi, I want to cnv analysis with CNVkit tool to clinical exome panel germline sample. I used this code: cnvkit.py batch S58.bam --normal S*.bam --targets …
What are those regions in the bed file? Are those location of genes?
These are target regions in genome. One of them can cover a gene or it can be bigger than a gene region