Mutation Software
I want a software which Analyse Mutation Type Such as Sense, Missense Mutation. And give its frequency. I cannot know any Computer Language.
mutation
• 1,464 views
•
link
updated
by
Kevin Blighe
•
written
by
ankurhalder116 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
CBioPortal: What does Mutation type: Targeted_Region means?
written by Frans •When using cBioPortal and looking at the mutations table for each sample, there is a column called "Mutation Type". While I understand most of its …
-
How to parse the output file of snpEFF
written by yoser4 •Hello everyone. I have a **vcf file** annotated with **snpEFF** (the input file for snpEFF was extracted from a snp vcf file of 99 samples, …
-
How to plot a image like this.
written by lincaijin1994 •This is a mutation landscape plot. I just want to know the name of the plot of such type and how to plot it using …
-
is it possible gene pathway analysis according to mutation type?
written by 9521ljh •if gene mutation type is point mutation or missense mutation on TP53 gene. are they same role in pathway ? i searched a lot but …
-
how to select gene mutation
written by 1561775911 •Hi,biostars, I have 200 patients with whole exome sequence and I want to build a multivariate Cox regression of overall survival with the gene mutations. …
-
Protein Structure comparison, WT and Mutant
written by sv91707Hi all, Does anyone know any tools or softwares, which I can use to compare effect of protein structure - of a validated mutation (missense), …
-
strand-biased mutation analysis on WES data
written by shiyang93 •I have some WES data of liver cancer, and I have got the somatic mutations. Now I want to know how to determine these mutations …
-
Representative AA change from point mutation given by genomic lcus
written by sak042 •We are having a hard time to determine a "representative" amino acid change that resulted from a genomic point mutation. Obviously, a genomic point mutation …
-
Get Non-Synonymous Point Mutations From Cosmicmart
written by antgomo •<p>Hi all,</p> <p>I'm trying to get non-synonymous point mutations from COSMIC using COSMICMart, however I don't know how to handle it, cos I'm confused about …
-
How To Annotate A Human Dna Position
written by Free Man<p>If I know a human DNA position and its code, for example: an "A" located in chr1:207510596-207510597(forward srand), how do I map this location to …
This paper might help you.
Please provide more details about the data that you currently have.
I Have Virus Genome in FASTA format. OS is Windows
You have a lot to do, in that case. Considering this, and also how you implied that you have no knowledge of a programming language, I would consider collaborating with a viral genomics group somewhere.