R libraries to match SNPs by positions (including switching and flipping)
0
0
Entering edit mode
3.0 years ago
timing ▴ 20

Is there an R package that can R libraries to match SNPs by positions (including switching and flipping)?

For example, it should match

chr1:1:C:T

with

chr1:1:T:C
chr1:1:G:A
chr1:1:A:G
R Bioconductor SNP • 545 views
ADD COMMENT
1
Entering edit mode

I'm not sure if this is a common requirement - packages/functions may not exist but it might be straightforward to write a function yourself.

Side note: I think this question might become what's called a code-golf question on the forum quickly.

ADD REPLY

Login before adding your answer.

Traffic: 2862 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6