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Trouble Executing The Modeller Model-Default.Py Script

I am completing an assignment using the MODELLER homology modeling software on my Mac running Mavericks. MODELLER 9.13 was fully installed on my computer, and Python 2.7 was updated. the alignment file and PDB and script are all in the same directory.The assignment calling for running the python script has me executing the following code to run the homology program.

cd ~/whateverdirectory

mod9v7 model-default.py

Executing this returns...

-bash: mod9v7: command not found

I've tried mod9v1 and mod9v13 as well but to no avail.

Does anyone what any clue what may have gone wrong? Why won't this code execute, and how can I fix it?

software homology modeling

1 answer

The problem was solved by using the following code, as newer version of the software use "." as opposed to "v"

mod9.13 model-default.py

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