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Any Recommendations For Software For Drawing Plasmid Maps?

I want to draw a picture of a plasmid, something along the lines of this image. i have tried all of the free software i could find does anyone have any suggestions of software that would produce an image this good, preferably free but I'll pay if I have to.

visualization software

Your preferred operating system is?

13 answers

If you're willing to use HTML syntax, you can design something pretty close using http://angularplasmid.vixis.com. It's free, open-source, and comes with plenty of examples of how to create what you're looking for. See below for examples:

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The best-known software for this kind of task is commercial, namely DNASTAR's Lasergene Seqbuilder and Invitrogen's Vector NTI.

Free alternatives are e.g. Serial Cloner or the open-source software GENtle.

Another open-source software alike is UGENE. It has plasmid annotation functions, restriction analysis, cloning framework, etc.

This is probably not what you are looking for, but if you want a hands on coding solution, Biopython's Genome Diagram can do something a bit like that. There is a basic example in the Tutorial.

SnapGene Viewer will do the trick.

You got the free Web interface MGV2 which I find really easy to use and gives nice pics. Login as "guest" to give it a try

PlasMapper does a pretty good job too

I'm surprised Circos hasn't been mentioned so far. The microbial genome recipe could be a good starting point.

Late to the post but........A great, but unfortunately paid option is Geneious. I used that in my thesis to make beautiful plasmid maps.

Use Mendelgen and it will look even better than the image you shared. Here's an example in normal and dark mode.

Gene Construction Kit® (GCK) is a useful tool for plasmid mapping, cloning simulation, and DNA analysis. It has been consistently reviewed as being one of the easiest to use applications for simulating multi-step cloning operations, and offers extensive flexibility in the graphical formatting of DNA sequences - and - generating those colorful, customized plasmid maps seen in publications. You can easily copy and paste graphical maps from GCK to image editing programs, or even create hi-res PDF (Mac) or XPS (Win) exports from within the program.

It's been around since the mid-90's, and was one of, if not "the very first software" for performing these types of graphical manipulations of DNA sequence data.

More information, and a free demo version is available from the website: http://www.textco.com

Check it out!

Another great free alternative is Genome Compiler.

Try WebDSV, it is a free web app, cross-platform, no registration needed, GenBank file format compatible.

Sapio Sciences Exemplar Electronic Lab Notebook bronze edition is free to academics and is a full featured ELN.

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