Hi , I would like to calculate RIC score of Recombination signal sequences (RSSs) DNA in human and mice for 12 RSS and 23 RSS. …

I used MUSCLE to calculate an SP (sum of pairs) score for MSA. I have multiple MSA with different sizes and different number of sequences. …

<p>I have CytoscanHD array data of 20 pairs of cancer data(tumor/normal). Is there any efficient tools to analyze these data.How can I get the DNA …

<p>hi,</p> <p>can anyone tell me about calculating raw value in blast. I know the formula that it is the sum of all match, mismatch and …

<p>Hi, I want to calculate the entropy of three sequences in python</p> <pre><code>CGTAA AATCC CCGCA </code></pre> <p>the formula of entropy is:</p> <pre><code>Entropy (A[:][i])= - ∑ …

<p>I have pairs of coding DNA sequences which I wish to perform pairwise <strong>codon alignments</strong> via <strong>Python</strong>, I have "half completed" the process.</p> <p><strong>So far..</strong></p> …

<p>hi i just want to confirm my method of using sum of pairs is correct.</p> <p>Lets say i have three sequences</p> <pre><code>ACCG_GTA CGAAAA__ TT_GTGTA </code></pre> …

<p> I m looking for a source code that can take multiple sequence alignment and return back the Sum-of-pairs or weight sum-of-pairs score based on …

<p>Hi, there are several script to count simple sequence repeat (SSR) in dna sequences (like MISA). i want to know that is there any script …

<p>Hi All, How Can I get local Blast score in matrix format??( I have score but I need in Matrix format) How can I run …