This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Exon Sequences From Ncbi Ftp

I've searched around but haven't been able to find this data. Is there any way to map any information associated with a gene (accession, ID, RNA Accession, Protein Accession) to exon coordinates using NCBI data?

I'm trying to keep my data source consistent but other sources are appreciated as well.

exon ncbi refseq

1 answer

I dont know whether I understand your question correctly. Just a suggestion, if you have your files in GenBank format. You can parse them using some scripts. You can use e-utilities to download the data based on GI, AC etc.

Log in to answer this question.