This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Comparison Of Biological Graphs/Networks

If I want to compare two biological networks/graphs (as in graph theory) what are the best clustering methods and which method is to be chosen for comparison? Can anyone suggest a good review/article for the same?

graph clustering network
• 3,930 views • link
updated by kuntal.bhusan • kuntal.bhusan • written by tigeradab tigeradab

2 answers

This stack exchange thread has a good discussion on choosing a clustering method, see this paper for a benchmark test on clustering methods and you can read through this thread for a comparision of community detection algorithms in igraph library

• 137 views • link
written by Sudeep Sudeep

You can use the tool 'CompNet' available at https://web.rniapps.net/compnet/

Publication link : https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1013-x

• 1 views • link
written by kuntal.bhusan • kuntal.bhusan

Log in to answer this question.

More posts like this