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Where Can I Find Some Agilent Sample Cel Files

I am working on a script to analyze affys and need to test/debug using various cel files, kinda got stuck trying to find agilent raw files .cel files.

Thank you.

affymetrix
• 4,826 views • link
updated by Neilfws Neilfws • written by lahat.albert • lahat.albert

I assumed "alignet" is supposed to be "agilent" and corrected it. Confusing that you then tag the post "affymetrix".

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written by Neilfws Neilfws

2 answers

CEL files are, to my knowledge, an Affymetrix ONLY format. Every CEL file I have ever worked with have come from Affymetrix platforms, whereas Agilent are always normal text files.

• 139 views • link
written by David Westergaard David Westergaard

Just search GEO for "Agilent" and you'll find a very large number of published experiments, many of which have the .cel files included.

• 418 views • link
written by Devon Ryan Devon Ryan

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