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Comparing Enriched Go Terms Using R Packages

What would the best way to compare over enriched GO terms from two different gene list? How would it be possible compare GO terms based on p-value distribution ?

r enrichment bioconductor

Same problem here, I've got two lists of GO terms generated over the same sequencing dataset by different analyses and want to show their concordance. Most terms do not line up exactly, unless we account for the tree structure somehow.

1 answer

Have you tried GOView?

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