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Searching Genes Are Available In Query Signalling Pathway Or Not?

I have a list of human breast cancer genes and I want to check that how many genes are available in particular pathway like Wnt, Notch, apoptosis, AML etc. Thanks,

gene kegg biomart pathway
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updated by Pierre Lindenbaum Pierre Lindenbaum • written by Abdul Rawoof Abdul Rawoof

2 answers

You can take a look in DAVID. Here you upload your genes and than annotate them using the functional annotation chart. If you choose KEGG as an option you can find the genes participating in the different pathways.

Assa

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written by Assa Yeroslaviz Assa Yeroslaviz

using QuickGO, and GO:0007219=" Notch signaling pathway"

http://www.ebi.ac.uk/QuickGO/GAnnotation?tax=9606&relType=IP&goid=%20GO:0007219%20&format=tsv

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written by Pierre Lindenbaum Pierre Lindenbaum

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