Hi Biostars, This is my first question on the site, so thanks for all the help I've gotten from lurking, and thanks for the help …

I just installed vcftools and I'm trying to find a way to use it to tell me the # of mappable positions and # of …

<p>Hi,</p> <p>Can anyone tell me where can I download Venter Genome's structural variants (hg19 or build 37)?</p> <p>Thanks,</p> <p>Eric</p>

<p>Can anyone tell me where I can find 1000GP CEU Trio's (NA12892, NA12891, and NA12878) validated variants or genotyping data?</p>

Can anyone tell me how to generate `vcf.gz` file and its index file `vcf.gz.tbi` in 1000 Genomes Project? <a href='ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/release/20110521/'>ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/release/20110521/

<p>Hi all, I am interested in calculating the integrated haplotype score (iHS) for SNPs surrounding a large candidate region of a particular human chromosome. <br …

<p>1000 genome project paper </p> <pre><code>Mapping copy number variation by population-scale genome sequencing </code></pre> <p>(http://www.nature.com/nature/journal/v470/n7332/full/nature09708.html) once released SV(structural variants) call-set based on both computational prediction …

<p>Hi, I am doing CNV detection based on read depth and wanted to compare my result with the golden set published by the 1000GP group. …

<p>I am trying to screen my NGS variants against known variations. The dbSNP132 VCF files seem like a great resource, but I'm not certain if …

<p>As you all know the 1000G sites are a sheer freaking delight to navigate. </p> <p>But I understand from here: <a href="http://www.1000genomes.org/page.php?page=announcements">http://www.1000genomes.org/page.php?page=announcements</a> that the exonic …