Hi all! I have assembled together 10 metagenomic datasets using CAP3. I need to extract specific contigs generated with specific samples. For instance, I need to extract the contigs generated using reads from dataset 1, the ones generated using reads from dataset 3, and so on, without taking into account contigs created by single samples. I want to see which samples shared reads and what contigs are created by shared reads. How can I do it? Best

Michael