Entering edit mode
3.3 years ago
plicht
▴
20
Hello,
I have a bray-curtis distance matrix and found significant associations on a grouping variable with adonis (permanova) using R package vegan. Now I would like to perfrom a post-hoc test to test between groups using Tukey with agricolae.
However, the function works only with aov and lm class objects, while adonis is of another class:
class (permanova_species_staging)
"adonis"
Is there a possibility to coerce it to run with Tukey test of agricoale?
Or is there another possibility of pairwise comparison post-hoc test?
As this is a pure stats question it would be a better match for https://stats.stackexchange.com/