extract split-read from bam/cram file
Hi,
Im a SC student, i have no knowledge in this filed and I want to extract split-read from cram file can anyone help me please?
thanks
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obaid_lama •
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By
split-readsdo you meanchimericalignments (where one part of the read is aligned to one chr and other somewhere else)?Could be related to this question about spliced reads: How To Extract Spliced Rnaseq Reads