get miRNA expression form total RNA data

HI I want to get miRNA expression from total RNA-seq. for alignment, I used HISAT2 as the aligner and mm10 as the reference genome. but I don't know how to get GTF file for miRNAs. I appreciate if anybody share his/her comment with me.

Thanks in advance.

rna-seq mirna

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written 5.5 years ago by aminijavad4 •

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