Hi, I was wondering if anyone knows if there is a default protein database linked to the MAF files of the TCGA project? Basically what …

<p>Hi</p> <p>It was easy to learn the possible mutational effects for protein with so much literature available. My case becomes difficult as it happens in …

<p>I have identified nonsynonymous mutation occurs on the contig position 1000 substitution by G/A through variant effect predictor. I got the transcript id &amp; protein …

<p>Hi everybody, I have HIV reverse transcription gene mutation samples .also I have mutation information and corresponding drug resistance of each sample. I want to …

<p>Hi all,</p> <p>I'm trying to get non-synonymous point mutations from COSMIC using COSMICMart, however I don't know how to handle it, cos I'm confused about …

<p>am looking for <strong>features</strong> to predict the impact of mutation on protein functions. I have protein sequence, I have "wpm" where w is wild type …

<p>Hi,</p> <p>am trying to "predict the effect of mutation impact on protein function", am trying to get features to achieve the prediction. I wonder what …

<p>Hi, I wonder how I can use mutant residue or wild type residue and position with blastpgp. Does it have parameters to accept any of …

<p>I want to know how to call Blast from java code, I have wildtype residue, mutant residue, position of mutation, and protein sequence</p> <p>I want …

<ol> <li><p>I want to pass a protein sequence using java code to find the relative frequency of wildtype residue in PSI-BLAST alignments</p></li> <li><p>Also I would …