Calling UTRs in TCGA dataset · Biostar

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Calling UTRs in TCGA dataset

I have a list of upstream ORFs in UTR with the start and end position and I have TCGA maf dataset as well. I want to call these uORFs in TCGA dataset. How can I do that? How should the start and end positions intersect? Or should I just find common genes and in both datasets. I have given the links to the two datasets as well.

Insights will be appreciated.

tcga cancer utr orf

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written 5.5 years ago by Jamie Watson •

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