Running mauveAligner in Linux
Hello.
After loading the mauve module with the command module load mauve/mauve-2015-02-13, I'm trying to run the mauveAligner as instructed in the program's website and I get the error:
mauveAligner: command not found...
Anyone has an idea why this could be the case?
I also tried to find the path of the aligner in order to run the program with the absolute path, but couldn't find it.
Thanks.
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I'm not familiar with loading tools as modules, but generally this issue is because the location isn't included in a directory your
$PATHcontains.yes but that's
module's job to set the correct PATH...Yeah thought that might be the case!
it's a problem with the module. The program was deleted or moved, or the module is badly configured. Ask your sysadim.
I installed mauve myself and now it runs. Thanks.