How to find eukaryotic genes from this FASTA format of a sequence in human chromosome 13?
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written
by
mohammad.shoumik.saad.aarman •
1 answer
Hi mohammad.shoumik.saad.aarman,
You can export a file (GTF/GFF3) containing the annotated genes within a region of interest by selecting GTF/GFF3 from the pop-up window after clicking the 'Export Data' button when viewing a genomic location in the Ensembl genome browser.
Alternatively, you can retrieve information about the genes within a region of interest by using the genomic coordinates as a filter in the BioMart tool or through the Ensembl REST API.
However, it seems that the region you have provided in your example is a masked region of the genome, and so there are no genes annotated in this region of the genome.
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