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Get list of urls of GSM data set of a GSE set

I have this GSE dataset ( GSE104279 ) (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE104279).

I want to make a table with set IDs and ftp urls to use it as a table in galaxy.org

I know that we can use ENA to get specific arrangement: https://www.ebi.ac.uk/ena/browser/

I tried to get:

SampleID Group URL

so I used : https://www.ebi.ac.uk/ena/browser/view/PRJNA412223

But nothing is showing.

Is there away to get these urls in the arrangement above?

rna-seq galaxy

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