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Way to check if gene A lies in the same ORF as gene B

Hey i wonder how to quickly check if gene A lies in the same open reading frame as gene B

best

X

gene protein orf
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written by Xylanaser Xylanaser

Hi! Could you provide an example?

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written by Fatima Fatima

Open reading frames are part of genes, not vice-versa. You cannot have two genes that are part of the same ORF.

Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

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written by i.sudbery i.sudbery

Do you mean how to check if the ORFs of two genes are in the same reading frame (i.e. 1, 2 or 3)?

yes.

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written by Xylanaser Xylanaser

Which organism? What annotation? Are these ORFs on the same or different transcripts?

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written by i.sudbery i.sudbery

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