This is a test version of Biostars. For the public version, visit https://www.biostars.org.
is the snp in a open reading frame ?

Hello all,

How do I check if a selected snp is in an open reading frame (any orf..)?

Thanks,
pini.

open-reading-frame snp gene
• 2,248 views • link
updated by Ram Ram • written by pinikoma • pinikoma

So in another word, whether if it is within a gene? One possible tool will be Annovar or you can use UCSC genome browser I guess.

• 0 views • link
updated by Ram Ram • written by Sam Sam

1 answer

BLASTX the full dbSNP nucleotide string against a low-redundancy protein database

• 0 views • link
written by cdsouthan cdsouthan

Log in to answer this question.

More posts like this