This is a test version of Biostars. For the public version, visit https://www.biostars.org.
how can I get detailed clinical data of a sample in a study included in GEO?

If I am interested in any study in GEO and I want to get the clinical data of the patient sample included in that study. then from where I can get detailed clinical data of a sample in a study included in GEO?

rna-seq

1 answer

On the bottom of the GEO pages there is a field with Series Matrix File(s) which is a (unhandy) text file with metadata that are often not being displayed when just browsing the page. I often found valuable information there. Still, there is no guarantee that the data you seek are in the or are even publically available. If not included in the paper (or its supplement) or on GEO you might need to contact the authors.

Log in to answer this question.