database of ligand->receptor->TF(or transcriptional target)
0
0
Entering edit mode
3.7 years ago
mk ▴ 290

Is there an online database or package-based tool to find interactions where each record has at least:

  1. ligand gene
  2. receptor gene
  3. transcriptional target
  4. direction of regulation [is (4) up or down in response to (1,2)]*

* (4) can just be omitted if (3) is always up in a certain database

Any species is fine (I have fish data), since I can just map the orthologs with biomart.

database signaling • 680 views
ADD COMMENT

Login before adding your answer.

Traffic: 1897 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6