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A Good Snp Dataset For Gwa Study

Hi I'm a master student and want to apply machine learning method in GWAS data for my master thesis, but I dont know which data set is appropriate.please tell me about properties of a good data set.

thanks for any input best regards, Alieh

gwas snp dataset
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updated by Jelena Aleksic Jelena Aleksic • written by alieh • alieh

2 answers

Here's one for Arabidopsis thaliana, a set of homozygous SNP markers. The 250K SNP dataset and over 100 phenotypes from Atwell et al., Nature 2010

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written by Arun Arun

If you'd like links to some metabolic disease ones, search for 'GWAS' at http://metabolicmine.org - it has a bunch of different studies, sorted by disease. Maybe one of those would be appropriate?

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written by Jelena Aleksic Jelena Aleksic

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