Question

Size difference BigWig vs. BedGraph files

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3.7 years ago

robbenstijn • 0

Hi everyone,

I am trying to convert a 5.34 GB BigWig file to a BedGraph file using the bigWigToBedGraph tool for ucsc. Does anyone know how large the output file will be? Any help will be much appreciated.

bigwig bigwigtobedgraph • 877 views

ADD COMMENT • link updated 3.7 years ago by Pierre Lindenbaum 161k • written 3.7 years ago by robbenstijn • 0

score 2 · Accepted Answer · 2020-07-31

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3.7 years ago

Pierre Lindenbaum 161k

Does anyone know how large the output file will be?

bigWigToBedGraph input.bigwig stdout  |wc -c

ADD COMMENT • link 3.7 years ago by Pierre Lindenbaum 161k

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Thank you Pierre,

I just ran the code and its output is 53195893894. I am not sure what this number means. Is it the number of characters, rows or mbs?

ADD REPLY • link 3.7 years ago by robbenstijn • 0