protein database and ensembl
Hello, I want to download a reference protein database from Ensembl for human but they show two databases; pep.all.fa and pep.abinitio.fa, which one is used as a reference database?
• 1,125 views
•
link
written
by
mdfardin374 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Download file from human cell atlas data portal
written by sandy •
-
Sequence identity between two protein sequences
written by Gene_MMP8
-
for choosing the reference for SNPeff
written by ? •
-
protein database peptide identification
written by mdfardin374 •
-
secretory proteins batch query
written by kanwarjag
-
Genome & Protein Retrival
written by Nitha •
-
Getting Human Chimpanzee Divergent Sites
written by Philippe
-
How To Get All Proteins Smaller Than 200 Amino Acids Out Of Ncbi Nr Database?
written by Niek De Klein
-
How To Map Protein Names From Ensembl!Metazoa To Jgi Names
written by Dror •
-
Mapping From Ensembl Main Database Schema To Ensembl Mart
written by User 6659 •
pep.all.fais used as reference.pep.abinitio.facontains predictions made based on the genomic sequence and not any other experimental evidence therefore not all entries represent biologically real proteins.actually this info is in the
READMEfile located in the same ftp directory where you download your.fafiles, e,g here.