DRIMSeq with technical replicates
Good afternoon,
I use DRIMSeq-workflow from this page http://bioconductor.org/packages/release/workflows/vignettes/rnaseqDTU/inst/doc/rnaseqDTU.html#statistical-analysis-of-differential-transcript-usage
to explore differential transcript usage.
Could you please point me out, where and how should I collapse technical replicates in DRIMSeq?
For example, for DEG search in DESeq2 I use collapseReplicates function before running DESeq.
Best regards, Poecile palustris
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Cross-posted: https://support.bioconductor.org/p/132620/
Hello Kevin,
Yes, thanks, I have duplicated this post on another forum just in case.
Best regards, Poecile palustris
Oh, I read about the disadvantages of cross-posting, I think I'll delete the post from here.