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Can you use salmon bootstraps to increase sample size for machine learning

Hi folks,

I've got some time course matched RNA seq experiments with n=6 for controls and exposures. I'm trying to do some machine learning classification with these. I'm wondering if using the bootstraps generated by salmon is a valid way of increasing my sample size or is this not really suitable?

rna-seq salmon machine learning
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updated by ATpoint ATpoint • written by yryan • yryan

1 answer

No, it is not. These are uncertainty estimates, not replicates.

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written by ATpoint ATpoint

Okay, thanks! (making up characters to comment)

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written by yryan • yryan

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