BETA for different conditions
HI! I have ChIP-seq data from two different conditions (stressed and non-stressed cells with overexpression of a TF), and RNA-seq data from those conditions and in two type of cells: WT and overexpressed. Is it possible to use BETA software to integrate these data and compare both conditions? Thank you so much for your help! This is the best group ever!
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Probably yes. For a more elaborate answer we need details which you currently do not provide.