Explanation of BETA output
Hello,
I have an RNA-Seq experiment( OCT4 KO vs WT mouse) and ChIP-Seq experiment ( WT vs OCT4 enriched ChIP sample).
I have analysed my Cuffdiff differential expressed gene output from my RNA-Seq with my OCT4 enriched peaks bed file using Cistrome BETA and obtained this output
am trying to understand what this Output means in terms of the BETA manual
Can I say that from this output in BETA in the absence of OCT4 the genes in the image output are rcontrolling the up regulated genes. What conclusions can I make from this output from BETA ?
Benjy
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Prakash
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benjyrolls
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benjyrolls
1 answer
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