BOLD ID engine API not working from shell
I tried to blast a sequence against the DNA barcoding database of BOLD (Barcoding of LIfe Database) via their API interface (http://v4.boldsystems.org/index.php/resources/api?type=idengine). I tried the command given on their page on my shell with curl or wget but I can't make it work:
curl -o output_new http://v4.boldsystems.org/index.php/Ids_xml?db=COX1_SPECIES_PUBLIC&sequence=TCTTTAGATTTTATTTTTGGAGCTTGGTCTGGCATAGTAGGCACCGCCC
wget http://v4.boldsystems.org/index.php/Ids_xml?db=COX1_SPECIES_PUBLIC&sequence=TCTTTAGATTTTATTTTTGGAGCTTGGTCTGGCATAGTAGGCACCGCCC
Both commands return "Sequence must be provided".
What am I missing out here?
• 1,014 views
•
link
0 answers
No answers yet.
Log in to answer this question.